{"id":1899,"date":"2011-08-04T21:25:03","date_gmt":"2011-08-04T20:25:03","guid":{"rendered":"http:\/\/jodischneider.com\/blog\/?p=1899"},"modified":"2011-08-05T11:01:00","modified_gmt":"2011-08-05T10:01:00","slug":"annotation-summaries-standardization-needed","status":"publish","type":"post","link":"https:\/\/jodischneider.com\/blog\/2011\/08\/04\/annotation-summaries-standardization-needed\/","title":{"rendered":"Annotation summaries: standardization needed"},"content":{"rendered":"<p>I&#8217;m finding an iPad amazing for reading PDFs &#8212; it&#8217;s like instant printing, with no weight to carry around (heavy, and they get wet). And with software <a href=\"https:\/\/jodischneider.com\/blog\/2011\/07\/31\/annotating-pdfs-on-an-ipad-goodreader-and-iannotatepdf\/\" title=\"Annotating PDFs with iAnnotate and GoodReader (comparison)\">like iAnnotatePDF and GoodReader<\/a>, I can annotate with just a bit more effort than while using pen and paper. <\/p>\n<p>iAnnotate (<a href=\"http:\/\/ryantrauman.com\/blog\/2010\/08\/08\/pdfs-on-the-ipad\/\" title=\"PDFs on the iPad\">video review<\/a>) is the killer app that convinced me to buy an iPad. But it has a killer flaw: I couldn&#8217;t keep my reading organized with it.<br \/>\n<a href=\"https:\/\/jodischneider.com\/blog\/wp-content\/uploads\/2011\/08\/iAnnotatePDF.png\"><img loading=\"lazy\" decoding=\"async\" src=\"https:\/\/jodischneider.com\/blog\/wp-content\/uploads\/2011\/08\/iAnnotatePDF.png\" alt=\"\" title=\"iAnnotatePDF\" width=\"360\" height=\"480\" class=\"alignnone size-full wp-image-1901\" srcset=\"https:\/\/jodischneider.com\/blog\/wp-content\/uploads\/2011\/08\/iAnnotatePDF.png 360w, https:\/\/jodischneider.com\/blog\/wp-content\/uploads\/2011\/08\/iAnnotatePDF-225x300.png 225w\" sizes=\"auto, (max-width: 360px) 100vw, 360px\" \/><\/a><\/p>\n<p>Hence I started <a href=\"https:\/\/jodischneider.com\/blog\/2011\/07\/31\/how-do-you-organize-papers-on-your-ipad\/\" title=\"iPad reference managers\">looking into reference managers<\/a> that would work well on the iPad&#8211;allowing annotation, making it easy to keep PDF&#8217;s organized, and ensuring that annotations were kept in a sensible place.<\/p>\n<p><a href=\"https:\/\/jodischneider.com\/blog\/2011\/08\/01\/sente-a-first-look\/\" title=\"Sente reference manager (review)\">Sente fulfills many of my requirements<\/a>. Sync seems to work effortlessly &#8212; well exceeding my experience with other products. The annotation process is reasonably smooth but so far I haven&#8217;t found a way to export annotations directly.<\/p>\n<p>This is a bit problematic because PDF editors don&#8217;t seem to play nice with each others&#8217; annotations. For instance, iAnnotate and GoodReader both export annotations for their own software. You get something very useful and readable like this:<\/p>\n<blockquote><p>\nPage 1, Highlight (Yellow):<br \/>\n Content: &#8220;The scientific use of Twitter has received some attention in previous work: [4] and [5] have performed several automatic analyses of tweets collected for different conference hashtags, including for example time series and lists of most active twitterers. [3] and [9] have furthermore carried out manual analyses of tweet contents for conference tweet datasets to determine, what conference participants are tweeting about. [10] are develop ing automatic methods for extracting semantic information from conference tweets. [6] have focused on tweets published by a set of manually identified scientists and have investigated their citation behavior.&#8221;<\/p>\n<p>Page 1, Highlight (Yellow):<br \/>\n Content: &#8220;citations and references are two sides of the same coin.&#8221;\n<\/p><\/blockquote>\n<p>But when you annotate in one program and get notes from another program, things get messier. <\/p>\n<p>For PDFs annotated externally, iAnnotate lists highlights without only grabs text from the notes, like this:<\/p>\n<blockquote><p>\nPage 1, Highlight (Custom Color: #fdf7bc):<\/p>\n<p>Page 2, Highlight (Custom Color: #fdf7bc):<\/p>\n<p>Page 2, Note (Custom Color: #fdffaa):<br \/>\n Not sure why this stands out from other lists by individuals.\n<\/p><\/blockquote>\n<p>GoodReader plays a bit nicer with annotations from other programs: it breaks annotations made by other programs at line boundaries. This makes summaries a little difficult to read, but at least there&#8217;s some content:<\/p>\n<blockquote><p>\nHighlight (color #FDF7BC):<br \/>\nfirst of all it will have to start with the general problem in<\/p>\n<p>Highlight (color #FDF7BC):<br \/>\nanalyzing scientific impact of Twitter:<\/p>\n<p>Highlight (color #FDF7BC):<br \/>\n[6] define<\/p>\n<p>Highlight (color #FDF7BC):<br \/>\ntweet to a peer-U\n<\/p><\/blockquote>\n<p>I&#8217;m currently checking into the standardization around annotations summaries. <\/p>\n<p>I&#8217;d be very interested to hear about how you detect metadata and annotation differences in PDFs. As examples, I&#8217;ve marked up a <a href=\"http:\/\/www.websci11.org\/fileadmin\/websci\/Posters\/153_paper.pdf\">recent WebSci poster<\/a>, with some annotations <a href='https:\/\/jodischneider.com\/blog\/wp-content\/uploads\/2011\/08\/GoodReader-annotations.pdf'>from GoodReader<\/a>, <a href='https:\/\/jodischneider.com\/blog\/wp-content\/uploads\/2011\/08\/iAnnotate-annotations.pdf'>from iAnnotatePDF<\/a>, and <a href='https:\/\/jodischneider.com\/blog\/wp-content\/uploads\/2011\/08\/Sente-annotations.pdf'>from Sente<\/a>.<\/p>\n","protected":false},"excerpt":{"rendered":"<p>I&#8217;m finding an iPad amazing for reading PDFs &#8212; it&#8217;s like instant printing, with no weight to carry around (heavy, and they get wet). And with software like iAnnotatePDF and GoodReader, I can annotate with just a bit more effort than while using pen and paper. iAnnotate (video review) is the killer app that convinced [&hellip;]<\/p>\n","protected":false},"author":3,"featured_media":0,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"footnotes":""},"categories":[5,3],"tags":[376,421,420,414],"class_list":["post-1899","post","type-post","status-publish","format-standard","hentry","category-books-and-reading","category-iphone","tag-annotation","tag-goodreader","tag-iannotate","tag-sente"],"_links":{"self":[{"href":"https:\/\/jodischneider.com\/blog\/wp-json\/wp\/v2\/posts\/1899","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/jodischneider.com\/blog\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/jodischneider.com\/blog\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/jodischneider.com\/blog\/wp-json\/wp\/v2\/users\/3"}],"replies":[{"embeddable":true,"href":"https:\/\/jodischneider.com\/blog\/wp-json\/wp\/v2\/comments?post=1899"}],"version-history":[{"count":8,"href":"https:\/\/jodischneider.com\/blog\/wp-json\/wp\/v2\/posts\/1899\/revisions"}],"predecessor-version":[{"id":1915,"href":"https:\/\/jodischneider.com\/blog\/wp-json\/wp\/v2\/posts\/1899\/revisions\/1915"}],"wp:attachment":[{"href":"https:\/\/jodischneider.com\/blog\/wp-json\/wp\/v2\/media?parent=1899"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/jodischneider.com\/blog\/wp-json\/wp\/v2\/categories?post=1899"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/jodischneider.com\/blog\/wp-json\/wp\/v2\/tags?post=1899"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}